MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella palaticanis
CIP106318T.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 282
bases: 1,802,210 bps
CDS: 1,615
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 41
misc RNA:
Total features: 1,664
Total number of protein coding genes annotated/found:
1,615
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5011|JADGKN010000009.1
SEQF5011_01656
Genome Viewer
NA
AA
1695/565
57717-56023
Proline--tRNA ligase
SEQF5011|JADGKN010000009.1
SEQF5011_01655
Genome Viewer
NA
AA
4326/1442
56011-51686
DNA polymerase III PolC-type
SEQF5011|JADGKN010000009.1
SEQF5011_01654
Genome Viewer
NA
AA
369/123
51482-51114
Single-stranded DNA-binding protein B
SEQF5011|JADGKN010000009.1
SEQF5011_01653
Genome Viewer
NA
AA
735/245
50355-51089
putative phosphatase
SEQF5011|JADGKN010000009.1
SEQF5011_01652
Genome Viewer
NA
AA
1752/584
50220-48469
putative multidrug resistance ABC transporter ATP-binding/permease protein YheI
SEQF5011|JADGKN010000009.1
SEQF5011_01651
Genome Viewer
NA
AA
1761/587
48476-46716
putative multidrug resistance ABC transporter ATP-binding/permease protein YheH
SEQF5011|JADGKN010000009.1
SEQF5011_01650
Genome Viewer
NA
AA
597/199
46055-46651
putative HTH-type transcriptional regulator YxaF
SEQF5011|JADGKN010000009.1
SEQF5011_01649
Genome Viewer
NA
AA
1164/388
44697-45860
Protein TsgA
SEQF5011|JADGKN010000009.1
SEQF5011_01648
Genome Viewer
NA
AA
1143/381
44482-43340
Cystathionine beta-lyase MetC
SEQF5011|JADGKN010000009.1
SEQF5011_01647
Genome Viewer
NA
AA
381/127
43313-42933
2-iminobutanoate/2-iminopropanoate deaminase
SEQF5011|JADGKN010000009.1
SEQF5011_01646
Genome Viewer
NA
AA
861/287
42463-41603
Methionine-binding lipoprotein MetQ
SEQF5011|JADGKN010000009.1
SEQF5011_01645
Genome Viewer
NA
AA
5148/1716
41313-36166
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01644
Genome Viewer
NA
AA
93/31
35703-35795
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01643
Genome Viewer
NA
AA
411/137
35261-35671
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01642
Genome Viewer
NA
AA
450/150
34790-35239
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01641
Genome Viewer
NA
AA
396/132
34390-34785
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01640
Genome Viewer
NA
AA
429/143
33941-34369
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01639
Genome Viewer
NA
AA
369/123
33300-33668
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01638
Genome Viewer
NA
AA
684/228
32606-33289
hypothetical protein
SEQF5011|JADGKN010000009.1
SEQF5011_01637
Genome Viewer
NA
AA
720/240
31525-32244
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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